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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs3830032 chr5:170818897 A/G CLEC2D chr12:9817565-9852151:+ -0.2 -6.42 3.2E-10 Box Plot
THCA rs3830033 chr5:170818906 T/A CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.03E-9 Box Plot
THCA rs3830034 chr5:170818969 A/G CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.03E-9 Box Plot
THCA rs3830035 chr5:170819887 G/A CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.03E-9 Box Plot
THCA rs3830036 chr5:170820024 G/A CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.03E-9 Box Plot
THCA rs3831108 chr14:39773435 A/AT LOC647288 chr13:75811890-75814517:- 0.59 6.38 4.16E-10 Box Plot
THCA rs3840358 chr5:43652044 T/TAATC UQCRC1 chr3:48636435-48648409:- -0.34 -5.97 4.51E-9 Box Plot
THCA rs3840520 chr5:170844915 T/TA CLEC2D chr12:9817565-9852151:+ -0.19 -6 3.81E-9 Box Plot
THCA rs3841325 chr16:79755011 A/AT PIWIL4 chr11:94277006-94354587:+ 0.25 5.98 4.4E-9 Box Plot
THCA rs384159 chr21:18943149 G/T CXADRP3 chr18:14477954-14499277:- -0.55 -8.29 1.16E-15 Box Plot
THCA rs3841665 chr8:11153007 TACTC/T SGK223 chr8:8175258-8244008:- -0.39 -7.48 3.69E-13 Box Plot
THCA rs3849670 chr5:49661475 C/G LOC647121 chr1:121260910-121313686:+ 0.37 7.92 1.67E-14 Box Plot
THCA rs385379 chr21:44006751 A/G TLN1 chr9:35696945-35732392:- 0.21 5.92 5.98E-9 Box Plot
THCA rs3855846 chr11:49412203 C/T FOLH1B chr11:89372395-89431886:+ 0.34 6 3.98E-9 Box Plot
THCA rs3856103 chr1:182050235 C/G DHTKD1 chr10:12110971-12165224:+ 0.19 6.02 3.52E-9 Box Plot